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1

The enigmatic archaeal virosphere

Prangishvili, David, Bamford, Dennis H., Forterre, Patrick, Iranzo, Jaime, Koonin, Eugene V., Krupovic, Mart

Journal:

Nature Reviews Microbiology

Year:

2017

Language:

english

File:

PDF, 7.66 MB

english, 2017

2

Archaeal viruses and bacteriophages: comparisons and contrasts

Pietilä, Maija K., Demina, Tatiana A., Atanasova, Nina S., Oksanen, Hanna M., Bamford, Dennis H.

Journal:

Trends in Microbiology

Year:

2014

Language:

english

File:

PDF, 1.57 MB

english, 2014

3

Buried Alive: Microbes from Ancient Halite

Jaakkola, Salla T., Ravantti, Janne J., Oksanen, Hanna M., Bamford, Dennis H.

Journal:

Trends in Microbiology

Year:

2016

Language:

english

File:

PDF, 2.69 MB

english, 2016

4

Structure Unifies the Viral Universe

Abrescia, Nicola G.A., Bamford, Dennis H., Grimes, Jonathan M., Stuart, David I.

Journal:

Annual Review of Biochemistry

Year:

2012

Language:

english

File:

PDF, 1.80 MB

english, 2012

5

Phospholipid molecular species profiles of tectiviruses infecting Gram-negative and Gram-positive hosts

Simonas Laurinavičius, Reijo Käkelä, Pentti Somerharju, Dennis H Bamford

Journal:

Year:

2004

Language:

english

File:

PDF, 404 KB

english, 2004

6

Gene XV of Bacteriophage PRD1 Encodes a Lytic Enzyme with Muramidase Activity

Javier Caldentey, Anna-Liisa Hänninen, Dennis H. Bamford

Journal:

Year:

1994

Language:

english

File:

PDF, 719 KB

english, 1994

7

On-line monitoring of changes in host cell physiology during the one-step growth cycle of Bacillus phage Bam35

Rimantas Daugelavičius, Aušra Gaidelytė, Virginija Cvirkaitė-Krupovič, Dennis H. Bamford

Journal:

Journal of Microbiological Methods

Year:

2007

Language:

english

File:

PDF, 438 KB

english, 2007

8

Mutagenicity and toxicity of amitrole. I. Drosophila tests

Irja Laamanen, Marja Sorsa, Dennis Bamford, Ulla Gripenberg, Tytti Meretoja

Journal:

Mutation Research/Genetic Toxicology

Year:

1976

Language:

english

File:

PDF, 319 KB

english, 1976

9

Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly

Mart Krupovic, Dennis H Bamford

Journal:

Current Opinion in Virology

Year:

2011

Language:

english

File:

PDF, 593 KB

english, 2011

10

High-throughput purification of double-stranded RNA molecules using convective interaction media monolithic anion exchange columns

Romanovskaya, Alesia, Sarin, L. Peter, Bamford, Dennis H., Poranen, Minna M.

Journal:

Journal of Chromatography A

Year:

2013

Language:

english

File:

PDF, 801 KB

english, 2013

11

Assembly of Bacteriophage PRD1 Spike Complex: Role of the Multidomain Protein P5 †

Caldentey, Javier, Tuma, Roman, Bamford, Dennis H.

Journal:

Year:

2000

Language:

english

File:

PDF, 161 KB

english, 2000

12

Archaeal Viruses Multiply: Temporal Screening in a Solar Saltern

Atanasova, Nina, Demina, Tatiana, Buivydas, Andrius, Bamford, Dennis, Oksanen, Hanna

Journal:

Year:

2015

Language:

english

File:

PDF, 2.18 MB

english, 2015

13

Prognosis of transient ischemic attacks in the Oxfordshire Community Stroke Project

Dennis, M., Bamford, J., Sandercock, P., Warlow, C.

Journal:

Year:

1990

Language:

english

File:

PDF, 2.69 MB

english, 1990

14

Cold-active bacteriophages from the Baltic Sea ice have diverse genomes and virus-host interactions

Senčilo, Ana, Luhtanen, Anne-Mari, Saarijärvi, Mikko, Bamford, Dennis H., Roine, Elina

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 767 KB

english, 2015

15

The complete genome of a viable archaeum isolated from 123-million-year-old rock salt

Jaakkola, Salla T., Pfeiffer, Friedhelm, Ravantti, Janne J., Guo, Qinggong, Liu, Ying, Chen, Xiangdong, Ma, Hongling, Yang, Chunhe, Oksanen, Hanna M., Bamford, Dennis H.

Journal:

Environmental Microbiology

Year:

2016

Language:

english

File:

PDF, 2.22 MB

english, 2016

16

The first known virus isolates from Antarctic sea ice have complex infection patterns

Luhtanen, Anne-Mari, Eronen-Rasimus, Eeva, Oksanen, Hanna M, Tison, Jean-Louis, Delille, Bruno, Dieckmann, Gerhard S, Rintala, Janne-Markus, Bamford, Dennis H

Journal:

FEMS Microbiology Ecology

Year:

2018

Language:

english

File:

PDF, 1.16 MB

english, 2018

17

Genome Sequence of PM2-Like Phage Cr39582, Induced from a Pseudoalteromonas sp. Isolated from the Gut of Ciona robusta

Leigh, Brittany A., Breitbart, Mya, Oksanen, Hanna M., Bamford, Dennis H., Dishaw, Larry J.

Journal:

Genome Announcements

Year:

2018

Language:

english

File:

PDF, 132 KB

english, 2018

18

The Unexplored Diversity of Pleolipoviruses: The Surprising Case of Two Viruses with Identical Major Structural Modules

Atanasova, Nina, Heiniö, Camilla, Demina, Tatiana, Bamford, Dennis, Oksanen, Hanna

Journal:

Year:

2018

Language:

english

File:

PDF, 4.15 MB

english, 2018

19

HCIV-1 and Other Tailless Icosahedral Internal Membrane-Containing Viruses of the Family Sphaerolipoviridae

Demina, Tatiana, Pietilä, Maija, Svirskaitė, Julija, Ravantti, Janne, Atanasova, Nina, Bamford, Dennis, Oksanen, Hanna

Journal:

Year:

2017

Language:

english

File:

PDF, 3.17 MB

english, 2017

20

Monitoring Physiological Changes in Haloarchaeal Cell during Virus Release

Svirskaitė, Julija, Oksanen, Hanna, Daugelavičius, Rimantas, Bamford, Dennis

Journal:

Year:

2016

Language:

english

File:

PDF, 2.28 MB

english, 2016

21

Analysis of the multimeric state of proteins by matrix assisted laser desorption/ionization mass spectrometry after cross-linking with glutaraldehyde

Jari Helin, Javier Caldentey, Nisse Kalkkinen, Dennis H. Bamford

Journal:

Rapid Communications in Mass Spectrometry

Year:

1999

Language:

english

File:

PDF, 111 KB

english, 1999

22

Use of lipophilic anions for estimation of biomass and cell viability

Rimantas Daugelavičius, Elena Bakienė, Janina Beržinskienė, Dennis H. Bamford

Journal:

Biotechnology and Bioengineering

Year:

2000

Language:

english

File:

PDF, 235 KB

english, 2000

23

Bacterial diversity at surface water in three locations within the Baltic sea as revealed by culture-dependent molecular techniques

Jarkko Hantula, Teija T. Koivula, Cheng Luo, Dennis H. Bamford

Journal:

Journal of Basic Microbiology

Year:

1996

Language:

english

File:

PDF, 1.10 MB

english, 1996

24

Changes in muscle subcellular fractions of baltic herring (Clupea harengus membras) during cold and frozen storage

Veli-Pekka Karvinen, Dennis H. Bamford, Bengt Granroth

Journal:

Journal of the Science of Food and Agriculture

Year:

1982

Language:

english

File:

PDF, 1.65 MB

english, 1982

25

Binding of lipophilic anions to microbial cells

Rimantas Daugelavičius, Elena Bakieṅ, Janina Beržinskieṅ, Dennis H. Bamford

Journal:

Bioelectrochemistry and Bioenergetics

Year:

1997

Language:

english

File:

PDF, 1.12 MB

english, 1997

26

Bacteriophage PRD1 DNA entry uses a viral membrane-associated transglycosylase activity

Pia S. Rydman, Dennis H. Bamford

Journal:

Molecular Microbiology

Year:

2000

Language:

english

File:

PDF, 260 KB

english, 2000

27

Sequential model of phage PRD1 DNA delivery: active involvement of the viral membrane

A. Marika Grahn, Rimantas Daugelavičius, Dennis H. Bamford

Journal:

Molecular Microbiology

Year:

2002

Language:

english

File:

PDF, 307 KB

english, 2002

28

The efficiency of the protein-dependent flocculation ofFlavobacteriumsp. is sensitive to the composition of growth medium

Jarkko Hantula, Dennis H. Bamford

Journal:

Applied Microbiology and Biotechnology

Year:

1991

Language:

english

File:

PDF, 452 KB

english, 1991

29

Bacteriophage resistance and flocculation deficiency ofFlavobacteriumsp. are phenotypically interrelated

Jarkko Hantula, Dennis H. Bamford

Journal:

Applied Microbiology and Biotechnology

Year:

1991

Language:

english

File:

PDF, 528 KB

english, 1991

30

Rapid classification of bacterial strains by SDS-polyacrylamide gel electrophoresis: population dynamics of the dominant dispersed phase bacteria of activated sludge

Jarkko Hantula, Anne Kurki, Pertti Vuoriranta, Dennis Henry Bamford

Journal:

Applied Microbiology and Biotechnology

Year:

1991

Language:

english

File:

PDF, 606 KB

english, 1991

31

High-frequency transfer of linear DNA containing 5′-covalently linked terminal proteins: electroporation of bacteriophage PRD1 genome intoEscherichia coli

Christina Lyra, Harri Savilahti, Dennis H. Bamford

Journal:

Molecular Genetics and Genomics

Year:

1991

Language:

english

File:

PDF, 494 KB

english, 1991

32

Computed tomography in patients with transient ischaemic attacks: when is a transient ischaemic attack not a transient ischaemic attack but a stroke?

M. Dennis, J. Bamford, P. Sandercock, A. Molyneux, C. Warlow

Journal:

Journal of Neurology

Year:

1990

Language:

english

File:

PDF, 504 KB

english, 1990

33

A novel lysis system in PM2, a lipid-containing marine double-stranded DNA bacteriophage

Mart Krupovič, Rimantas Daugelavičius, Dennis H. Bamford

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 1.35 MB

english, 2007

34

Identification and functional analysis of the Rz/Rz1-like accessory lysis genes in the membrane-containing bacteriophage PRD1

Mart Krupovič, Virginija Cvirkaitė-Krupovič, Dennis H. Bamford

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 639 KB

english, 2008

35

Holin of bacteriophage lambda: structural insights into a membrane lesion

Mart Krupovič, Dennis H. Bamford

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 119 KB

english, 2008

36

An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope

Maija K. Pietilä, Elina Roine, Lars Paulin, Nisse Kalkkinen, Dennis H. Bamford

Journal:

Molecular Microbiology

Year:

2009

Language:

english

File:

PDF, 11.06 MB

english, 2009

37

Determination of taxonomic resolution capacity of conventional one-dimensional SDS-polyacrylamide gel electrophoresis of whole-cell proteins using Enterobacteriaceae

Jarkko Hantula, Timo K. Korhonen, Dennis H. Bamford

Journal:

FEMS Microbiology Letters

Year:

1990

Language:

english

File:

PDF, 293 KB

english, 1990

38

10.1038/35065653

Butcher, Sarah J., Grimes, Jonathan M., Makeyev, Eugeny V., Bamford, Dennis H., Stuart, David I.

Journal:

Year:

2001

Language:

english

File:

PDF, 465 KB

english, 2001

39

Membrane structure and interactions with protein and DNA in bacteriophage PRD1

Cockburn, Joseph J. B., Abrescia, Nicola G. A., Grimes, Jonathan M., Sutton, Geoffrey C., Diprose, Jonathan M., Benevides, James M., Thomas, George J., Bamford, Jaana K. H., Bamford, Dennis H., Stuart

Journal:

Year:

2004

Language:

english

File:

PDF, 253 KB

english, 2004

40

qiRNA is a new type of small interfering RNA induced by DNA damage

Lee, Heng-Chi, Chang, Shwu-Shin, Choudhary, Swati, Aalto, Antti P., Maiti, Mekhala, Bamford, Dennis H., Liu, Yi

Journal:

Year:

2009

Language:

english

File:

PDF, 428 KB

english, 2009

41

Virus evolution: how far does the double β-barrel viral lineage extend?

Krupovič, Mart, Bamford, Dennis H.

Journal:

Nature Reviews Microbiology

Year:

2008

Language:

english

File:

PDF, 945 KB

english, 2008

42

Does the evolution of viral polymerases reflect the origin and evolution of viruses?

Krupovič, Mart, Bamford, Dennis H.

Journal:

Nature Reviews Microbiology

Year:

2009

Language:

english

File:

PDF, 207 KB

english, 2009

43

Minor proteins, mobile arms and membrane–capsid interactions in the bacteriophage PRD1 capsid

San Martín, Carmen, Huiskonen, Juha T., Bamford, Jaana K. H., Butcher, Sarah J., Fuller, Stephen D., Bamford, Dennis H., Burnett, Roger M.

Journal:

Natural Structural Biology

Year:

2002

Language:

english

File:

PDF, 1.59 MB

english, 2002

44

The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes

Huiskonen, Juha T, Kivelä, Hanna M, Bamford, Dennis H, Butcher, Sarah J

Journal:

Nature Structural and Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.09 MB

english, 2004

45

Isolation of a Phospholipid-Free Protein Shell of Bacteriophage PRD1, an Escherichia coli Virus with an Internal Membrane

Cheng Luo, Sarah Butcher, Dennis H. Bamford

Journal:

Year:

1993

File:

PDF, 563 KB

1993

46

Bacteriophage PRD1 Proteins: Cross-Linking and Scanning Transmission Electron Microscopy Analysis

Cheng Luo, Jarkko Hantula, Willem Tichelaar, Dennis H. Bamford

Journal:

Year:

1993

File:

PDF, 469 KB

1993

47

Dissociation of the Lipid-Containing Bacteriophage PRD1: Effects of Heat, pH, and Sodium Dodecyl Sulfate

Javier Caldentey, Cheng Luo, Dennis H. Bamford

Journal:

Year:

1993

File:

PDF, 428 KB

1993

48

Topology of the Major Capsid Protein P3 of Bacteriophage PRD1: Analysis Using Monoclonal Antibodies and C-Terminally Truncated Proteins

Jaana K.H. Bamford, Cheng Luo, Jarmo T. Juuti, Vesa M. Olkkonen, Dennis H. Bamford

Journal:

Year:

1993

File:

PDF, 425 KB

1993

49

Purification of Viruses and Macromolecular Assemblies for Structural Investigations Using a Novel Ion Exchange Method

Laura Walin, Roman Tuma, George J. Thomas Jr., Dennis H. Bamford

Journal:

Year:

1994

File:

PDF, 542 KB

1994

50

NTP Binding Induces Conformational Changes in the Double-Stranded RNA Bacteriophage ø6 Subviral Particles

Päivi M. Ojala, Anja O. Paatero, Dennis H. Bamford

Journal:

Year:

1994

File:

PDF, 536 KB

1994

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